I can not say 100% for sure but i'm 90% sure that your will have to bend them or remove them. When I installed my eagle rods I had to bend them in order for the rods to clear them....that was using a gsr block w/gsr crank....the ls is going to swing further and probably hit them..
I know Golden eagle make the oil squirter caps for stroked motors, although yours isn't going from 1.8 to 2ltr like the stroker kits....
Caps are only $12....worst case scenero you have to buy a set...Are you running stock rods and pistons?