I ran into the same problem this summer, I ended up just setting my engine on the ground after trying to find suitable thread material all over the place [I have one engine on the stand, but the stand was actually cut to let the bolts work]. Eventually I'll probably have a set of bolts made assuming I keep working with Hondas.
And yeah, flywheel bolts are 17mm, clutch is 10mm, both 12 pt.
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-Harry
AIM: NDcissive
CRX and Pre '92 Civic, Engine Tech and Tuning, & Track and Autocross Forum Mod