hydraulic clutch linkage...? cable/mechanical...? what is it... if its hydraulic check both the master and slave cylinder... and the lines... take the dust boot off the tranny itself.. and look at how the slave cylinder pushes on the throuought bearing... if its cable or mechanical check the linkage all the way from the pedal to the clutch itself, also when when u alinged the pilot bearing with the crank shaft did you use the alignment tool that should come with the clutch kit? if not that could make for rough movement of parts