The diff sizes should be the same, as well as the bearings, you should use whatever final drive came in the tranny to avoid excessive bind or lash though, unless you can verify that the clearances are ok, because you normally have to change the mainshaft to be able to change the final gear size since they're a mated set designed for a certain mesh in the tranny.
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-Harry
AIM: NDcissive
CRX and Pre '92 Civic, Engine Tech and Tuning, & Track and Autocross Forum Mod