Try a different dealership. The one you're going to is garbage. Your car is covered bumper to bumper for 3 years, 36,000 miles, so most of this stuff should be taken care of for free. (not act of god or road condition issues though)
If you're still having unknown problems and the dealer has clear documentation of things that couldn't be fixed ... take it to a laywer and have the lemon law put into effect.
Honda's are terrific cars over all ... seems like you hit the 1% defect percentile though. :happysad: