Ok, issue resolved today!!
Since I started this thread, I have been back to Pep Boys two more times making it 4 times total.
So, about 3 weeks ago, I started getting some serious scrubbing and grinding noises coming from my front brakes. I had lost faith in Pep Boys and broke down and took my car into the Honda dealership to have them diagnose my problem.
Luckily, the dealer inspected at no charge my brake system. They determined that my calipers were bad. The seal around the pistons were busted on both front rotors, which in turn would cause them to stick. With driving at 80mph for 65 miles one way to work, this sticking was causing my pads to rub my rotors, which causes them to heat up, which causes the premature warping. So, Honda said they would install new Honda pads, rotors and remanufactured calipers for..get this...$858.00!! But, they were gonna cut me a "brake"

and do it for $664.00. Um..no thanks, but hey, appreciate you looking at it for free for me.
Since I had previously requested Pep Boys to really look at my calipers and they determined they were ok visually, I don't think they really got them off the car to look at the seals. So, then after I left Honda, I went back to Pep Boys. Spoke with a guy there and he told me since I have been having so much trouble, to come back in the morning when the svc manager is there and he should be able to hook me up. I did that today.
So, they replaced my ceramic pads, premium rotors under warranty since I got it from them and installed new calipers on each side for me. So, they did all of that for $175 out the door. I don't have the time to press my rotors off and all that good stuff, so basically I save a GRIP of cash vs the dealership (as always) and now all my brake components are warrantied through Pep Boys and the cars brakes feel like new and no drama what-so-ever.
I know this was an old thread I started, but I wanted to express my happiness that I can close this super nagging issue and perhaps shed light on this topic to others who may be going through the same problem.
thanks for your replies trying to help me diagnose.